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ez tet plko puro  (Addgene inc)


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    Structured Review

    Addgene inc ez tet plko puro
    Ez Tet Plko Puro, supplied by Addgene inc, used in various techniques. Bioz Stars score: 94/100, based on 44 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/ez+tet+plko+puro/EZ-Tet-pLKO-Puro+(Plasmid+%2385966)/med_rxiv__64898__2025__12__19__25342655-277-29-30
    Average 94 stars, based on 44 article reviews
    ez tet plko puro - by Bioz Stars, 2026-10
    94/100 stars

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    Related Articles

    Knockdown:

    Article Title: Augment proteasome inhibitor efficacy activates CD8 + T cell-mediated antitumor immunity in breast cancer
    Article Snippet: Guide RNAs (gRNAs) were subsequently cloned and inserted into lentiCRISPRv2 Puro (Addgene #52961) or TCLV2 (Addgene #87360) according to the standard protocol. .. For gene knockdown, the corresponding shRNA sequences were subsequently cloned and inserted into pLKO.1-Puro (Addgene #8453) or EZ-Tet-pLKO-Puro (Addgene #85966). ..

    shRNA:

    Article Title: Augment proteasome inhibitor efficacy activates CD8 + T cell-mediated antitumor immunity in breast cancer
    Article Snippet: Guide RNAs (gRNAs) were subsequently cloned and inserted into lentiCRISPRv2 Puro (Addgene #52961) or TCLV2 (Addgene #87360) according to the standard protocol. .. For gene knockdown, the corresponding shRNA sequences were subsequently cloned and inserted into pLKO.1-Puro (Addgene #8453) or EZ-Tet-pLKO-Puro (Addgene #85966). ..

    Article Title: Colorectal cancer risk variants in the 11q13.4 locus are associated with variable POLD3 transcript expression which may promote DNA damage and telomere shortening in colorectal cancer cells
    Article Snippet: For the Genomics England CRC cohort (N=163), Spearman correlation coefficients were similarly calculated among POLD3 transcripts within genotype-defined groups (heterozygous vs homozygous carriers of the rs577 risk allele). .. POLD3 shRNA target sequences were obtained from Broad institute GPP web portal (Clone ID: TRCN0000233258, TRCN0000233261) and were inserted into shRNA sequences as described here. shRNAs were cloned into EZ-Tet-pLKO-Puro (Addgene #85966) followed by validation by Sanger sequencing and restriction digest. .. Immortalised human colorectal adenocarcinoma cell lines CACO2 and RKO (acquired from ATCC) were maintained in Gibco Dulbecco’s Modified Eagle Medium (DMEM) (Sigma-Aldrich) supplemented with 10% foetal bovine serum (FBS) (Sigma-Aldrich), and 1% penicillin streptomycin (Sigma-Aldrich).

    Clone Assay:

    Article Title: Augment proteasome inhibitor efficacy activates CD8 + T cell-mediated antitumor immunity in breast cancer
    Article Snippet: Guide RNAs (gRNAs) were subsequently cloned and inserted into lentiCRISPRv2 Puro (Addgene #52961) or TCLV2 (Addgene #87360) according to the standard protocol. .. For gene knockdown, the corresponding shRNA sequences were subsequently cloned and inserted into pLKO.1-Puro (Addgene #8453) or EZ-Tet-pLKO-Puro (Addgene #85966). ..

    Article Title: Supporting Information for OGA mutant aberrantly hydrolyzes O-GlcNAc modification from PDLIM7 to modulate p53 and cytoskeleton in promoting cancer cell malignancy
    Article Snippet: To generate pgPDLIM7 for protein purification, OGT and PDLIM7 were subcloned into pETDUET (MilliporeSigma) in which PDLIM7 was fused with an N-terminal His6tag. .. The shRNAs targeting the 3’-UTR of OGA (TRCN0000285410) or PDLIM7 (TRCN0000350814) were selected from the Genetic Perturbation Platform (Broad Institute) and cloned into the EZ-Tet-pLKO-Puro (Addgene #85966) to generate EZ-Tet-pLKO-Puro-shOGA or EZ-Tet-pLKO-Puro-shPDLIM7 as previously described (5). .. Human full-length OGA expression plasmid pcDNA5-FRT-TO-Flag-OGA-HA was generated by PCR amplification of OGA using primers encoding the N-terminal Flag3 (DYKDHDGDYKDHDIDYKDDDDK)-tag and C-terminal HA (YPYDVPDYA)-tag, and subcloned into the pcDNA5-FRT-TO (Addgene #40998). pcDNA5-FRTTO-Flag-OGA was generated similarly using primers encoding the Flag3-tag and subcloned into pInducer20 via Gateway LR Clonase II (Life Technologies).

    Article Title: Colorectal cancer risk variants in the 11q13.4 locus are associated with variable POLD3 transcript expression which may promote DNA damage and telomere shortening in colorectal cancer cells
    Article Snippet: For the Genomics England CRC cohort (N=163), Spearman correlation coefficients were similarly calculated among POLD3 transcripts within genotype-defined groups (heterozygous vs homozygous carriers of the rs577 risk allele). .. POLD3 shRNA target sequences were obtained from Broad institute GPP web portal (Clone ID: TRCN0000233258, TRCN0000233261) and were inserted into shRNA sequences as described here. shRNAs were cloned into EZ-Tet-pLKO-Puro (Addgene #85966) followed by validation by Sanger sequencing and restriction digest. .. Immortalised human colorectal adenocarcinoma cell lines CACO2 and RKO (acquired from ATCC) were maintained in Gibco Dulbecco’s Modified Eagle Medium (DMEM) (Sigma-Aldrich) supplemented with 10% foetal bovine serum (FBS) (Sigma-Aldrich), and 1% penicillin streptomycin (Sigma-Aldrich).

    Over Expression:

    Article Title: HIF1α-PHD1-FOXA1 Axis Orchestrates Hypoxic Reprogramming and Androgen Signaling Suppression in Prostate Cancer.
    Article Snippet: The HA-tagged HIF1α expression plasmid was obtained from Addgene (plasmid #18949, Watertown, MA, USA), while additional constructs including Myc-tagged HIF1α, V5-tagged PHD1, PHD2, and PHD3, as well as shRNA expression vectors targeting relevant genes, were generously provided by Prof. Johanna Myllyharju (University of Oulu). .. For inducible gene silencing or overexpression, the pLKO.1-TetON-Puro-HIF1α (Addgene #118704, Watertown, MA, USA) and EZ-Tet-pLKO-Puro (Addgene #85966, Watertown, MA, USA) vectors were utilized. .. Transient transfections were conducted using Lipofectamine 3000 reagent (Thermo Fisher Scientific, Waltham, MA, USA) in accordance with the manufacturer’s instructions.

    Article Title: HIF1α-PHD1-FOXA1 Axis Orchestrates Hypoxic Reprogramming and Androgen Signaling Suppression in Prostate Cancer
    Article Snippet: The HA-tagged HIF1α expression plasmid was obtained from Addgene (plasmid #18949, Watertown, MA, USA), while additional constructs including Myc-tagged HIF1α, V5-tagged PHD1, PHD2, and PHD3, as well as shRNA expression vectors targeting relevant genes, were generously provided by Prof. Johanna Myllyharju (University of Oulu). .. For inducible gene silencing or overexpression, the pLKO.1-TetON-Puro-HIF1α (Addgene #118704, Watertown, MA, USA) and EZ-Tet-pLKO-Puro (Addgene #85966, Watertown, MA, USA) vectors were utilized. .. Transient transfections were conducted using Lipofectamine 3000 reagent (Thermo Fisher Scientific, Waltham, MA, USA) in accordance with the manufacturer’s instructions.

    Plasmid Preparation:

    Article Title: PRPF40A induces inclusion of exons in GC-rich regions important for human myeloid cell differentiation
    Article Snippet: .. EZ-Tet-pLKO-Puro was a gift from Cindy Miranti (Addgene plasmid # 85966) ( ). .. We added 50 ng/ml of doxycycline (Sigma) to 125 000 cells/ml in 4 ml of media to induce knockdown of target, and refreshed the doxycycline media every 48 h. We overexpressed PRPF40B using pLV-EF1a-IRES-Blast using lentiviral transduction.

    Biomarker Discovery:

    Article Title: Colorectal cancer risk variants in the 11q13.4 locus are associated with variable POLD3 transcript expression which may promote DNA damage and telomere shortening in colorectal cancer cells
    Article Snippet: For the Genomics England CRC cohort (N=163), Spearman correlation coefficients were similarly calculated among POLD3 transcripts within genotype-defined groups (heterozygous vs homozygous carriers of the rs577 risk allele). .. POLD3 shRNA target sequences were obtained from Broad institute GPP web portal (Clone ID: TRCN0000233258, TRCN0000233261) and were inserted into shRNA sequences as described here. shRNAs were cloned into EZ-Tet-pLKO-Puro (Addgene #85966) followed by validation by Sanger sequencing and restriction digest. .. Immortalised human colorectal adenocarcinoma cell lines CACO2 and RKO (acquired from ATCC) were maintained in Gibco Dulbecco’s Modified Eagle Medium (DMEM) (Sigma-Aldrich) supplemented with 10% foetal bovine serum (FBS) (Sigma-Aldrich), and 1% penicillin streptomycin (Sigma-Aldrich).

    Sequencing:

    Article Title: Colorectal cancer risk variants in the 11q13.4 locus are associated with variable POLD3 transcript expression which may promote DNA damage and telomere shortening in colorectal cancer cells
    Article Snippet: For the Genomics England CRC cohort (N=163), Spearman correlation coefficients were similarly calculated among POLD3 transcripts within genotype-defined groups (heterozygous vs homozygous carriers of the rs577 risk allele). .. POLD3 shRNA target sequences were obtained from Broad institute GPP web portal (Clone ID: TRCN0000233258, TRCN0000233261) and were inserted into shRNA sequences as described here. shRNAs were cloned into EZ-Tet-pLKO-Puro (Addgene #85966) followed by validation by Sanger sequencing and restriction digest. .. Immortalised human colorectal adenocarcinoma cell lines CACO2 and RKO (acquired from ATCC) were maintained in Gibco Dulbecco’s Modified Eagle Medium (DMEM) (Sigma-Aldrich) supplemented with 10% foetal bovine serum (FBS) (Sigma-Aldrich), and 1% penicillin streptomycin (Sigma-Aldrich).

    other:

    Article Title: Augment proteasome inhibitor efficacy activates CD8 + T cell-mediated antitumor immunity in breast cancer
    Article Snippet: EZ-Tet-pLKO-Puro , Addgene , Cat #: 85966.



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